PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04715
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 144aa    MW: 16322.4 Da    PI: 5.3285
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04715genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19655255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a+k + g
  PEQU_04715  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAAKFMCG 55
                69******9.**********8.....334***********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.39E-32563No hitNo description
SMARTSM003807.7E-39669IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-34664IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-21664IPR016177DNA-binding domain
PfamPF008474.6E-13655IPR001471AP2/ERF domain
PROSITE profilePS5103220.877663IPR001471AP2/ERF domain
PRINTSPR003672.1E-11718IPR001471AP2/ERF domain
PRINTSPR003672.1E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MPKLQRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAARAYDEAA KFMCGARART  60
NFPLNSSSVS ALSPSLVAKL ERCCIASQEE MRRAKVEMES EEMKCMDEES IEEMIEELTY  120
YGSVEISSSY SSSSTATSCS NSIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A8e-20368268ATERF1
2gcc_A8e-20368268ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00526DAPTransfer from AT5G25190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008779295.12e-65PREDICTED: ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW57e-48ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLM0SKD77e-62M0SKD7_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P02200_0012e-61(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.16e-29ERF family protein